Not a silly question if you are not familiar with aquarium filters. There are many types, internal, external, hang on,under gravel etc. If it is internal, which if it is sitting inside the tank I assume it is an internal filter then it needs to be fully covered by water. There is usually a piece of air hose attatched to the filter that hangs outside the tank. It will probablly be best to do some research if you are not sure. Just google aquarium filters, I could help more if I knew what it looked like. I have 8 fish tanks and certificate 2 and 3 in aquaculture so if you have any other questions I may be able to help. Regards, Seamisty